Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVLDQNENKINSLKLNLEKLEDNYHRENM---EIEDKLYSLEDKKNELETYLQEVYEETSHFLRQNDSDGSTFMSLNRIIESYQMELIDEYENYKQTIIVQEENSRTQFLKDRV-KLENDISSLEGRKYY
3DTP Chain:A ((855-969))
------EREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEE------MNAELTAKKRKLEDECSELKRDIDDLELTL--
General information:
TITO was launched using:
RESULT:
Template:
3DTP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12220 for 440 contacts (27.8/contact) +
2D Compatibility (PS) -11949 + (NN) -4300 + (LL) 1124
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -7455.0 ( -16.94 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3DTP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DTP-query.scw
PDB file :
Tito_Scwrl_3DTP.pdb
: