Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MFIYGPIFREFRLNRQFSLKQVASNELSVSQLSRFERGESDLSLTKFLGALEAID-LSISEFMYRVNKYQKSDQISLMSQMAQYHYQRDVAG-LEKMISVEEGKLKKDSSDIRCRLNIVLFRGMICECDSSRKMSEEDLCFLSDYLFQK-DSWEISDYILIGNLYRYYNTRYICQLVKE-VINQKEYYRDIYTNRNVVEATLLNVVETLIERRALEEATFFVEKVEALLN---NERNAYHRIILLYEKGFLA-YAKGDSRGIQSMKQAIFCFQAIGSKHHVENFQEHFNRVTRL---- |
| 4RYK Chain:A ((4-303)) | HHHSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRI-MVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQ-ALLDKITLERTEQSEVRKAILHTRIQTINHYLRTNVSNISDEYKKIIHDYLW-KMQTWTLEEVRIFSNGISFFEEEVQIHFYQIMLKSYEKY-RYYDRGRLLFCHLFANLTDELIIQNKINYANLVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQAKRAIQTWKELHYEAIADLYSVVLKQFLEKENIQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153379 for 1958 contacts (-78.3/contact) +
2D Compatibility (PS) -29757 + (NN) -10259 + (LL) 240
1D Compatibility (HY) -14000 + (ID) 2550
Total energy: -209705.0 ( -107.10 by residue)
QMean score : 0.437
|
|
|