Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILYHYTTVETLLLILNYKTLRFKSLLYVDDPLEPSTSDFGNLGGFKYVSCWTDTPNSIPQWTMYSDNMTGVCIGISFDKETDVFLTEKFSLSESSEPIDMVNALHPLKSGLLVTNNKYVPSLEQIRYTDDVSLITPQVVSSDDKFTTINLASNGIYKTTEWSFQNEQRFSFQIFPLPI----DL-----VLESMNANKGDLTEIINSFIS-VKPKEYFDLDLNPTIFNNMTITFGKRCSAEDKLKVSKFLEDNKFHIPLFDSSVNIKP |
| 4KVJ Chain:A ((459-576)) | ---------------------------------------------------------------------------------------------------------------------------------------LIPQNLDGTNRSDRIDLAALEVYRDRERSVPRYNEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIKGFAISETAFNIFILMASRRLEA-DRFFTSNFNEETYTKKGMQWVKTTEGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16559 for 595 contacts (27.8/contact) +
2D Compatibility (PS) -10861 + (NN) -145 + (LL) 8076
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: 5779.0 ( 9.71 by residue)
QMean score : -0.128
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