Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIRKDKDGGWIVDISNGFDPITLKQRRVVRKGYKTKKEATEAEHYLRSVELKERFYGAKITVSML-YELLKEEDNINHRKVSYINTQENNYNKHIKDYFSKVDYVGKLTYEDIYQFREHLRKKVAQNSDNLLSSNTINKIMILLKKIFDIGLRKGYYSTNPVKLLKKLPIEKTKMQFWTVKEFQQFLTLFEPEEYNIKLLFTVLFFTGLRLGEALALTWQDIDFSSNTIHITKSVYVNKGISHINTTKTKAGTRRIVL-------NKKLSQELQDWQQQQKHLLEQFTSDNLTLQVFQ---SSPITITKNAIEKQYKKILERDNTLK----IIRIHDFRHSHASLLINQGEDYLVVKERLGHASITTTIDTYSHLYPSKQKDLADKLDDLI |
| 1Z1B Chain:A ((71-350)) | ---------------------------------------------------------DNSVTLHSWLDRYEKILA-SRGIKQKTLINYMSKIK-AIRRGLPDAP-LEDITTKEIAAMLNGYIDE--------GKAASAKLIRSTLSDAFREAIAEGHITTNHVAATR-AAKSKVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIV--DGYLYVEQ-------------SKTG-VKIAIPTALHIDALGISMKETLDKCKEIL--------GGE---TIIASTRREP--LSSGTVSRYFMRARKA-SGLSFEGDPPTFHELRSLSARL-YEKQISDKFAQHLLGHKSDTMA-SQYRDDRGREWDKIEIK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100080 for 1943 contacts (-51.5/contact) +
2D Compatibility (PS) -28167 + (NN) -8299 + (LL) 7608
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -135788.0 ( -69.89 by residue)
QMean score : 0.527
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