Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------------------------------------------------------MTIIGFTSNPSALLLQLTETSVIAKQIVLPRASPYFQILDNKQFDFGWENN--ILVICDPITSNNEFELLFPSML-PHATTGDFFILLS--ILDKQDGAIIAGTLGLKDYATVRKNLRFRRNNKYLPIIWKEGTNEADKIEENSSN-------
4OHC Chain:A ((10-230))
TGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQIDAVAGGETAGIPFAAWIADRMMVPMQYVRKKPKGFGR---NAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLFHYNIFKESVSVLKDIDVDLHALATWWDVLRVAKASGYFE---TKTLDEVEKFLHAPAEWSAAHGG
General information:
TITO was launched using:
RESULT:
Template:
4OHC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71851 for 951 contacts (-75.6/contact) +
2D Compatibility (PS) -14892 + (NN) -10102 + (LL) 868
1D Compatibility (HY) -8000 + (ID) 1100
Total energy: -105077.0 ( -110.49 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_4OHC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OHC-query.scw
PDB file :
Tito_Scwrl_4OHC.pdb
: