Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKFFLESERLIIRPLEESDYDSWYTSFMNRGPSLTPFDDGILDMSMCDINWFKNLVNLQRKEWESDIVYIFGVFLKS-GEHVGMLNIVTLARADMQWGELGYVFHNQFWSNGYAFESILALLNSTYEKLGFHHIEAQITPGNERSENLVRRLGLTYETTRKDFSFENGKWTDKLIYSINLHNNNLE
2FCK Chain:A ((7-181))
--DFQIVTQRLQLRLITADEAEELVQ-CIRQSQTLHQWVDW------FSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFY-HTFNMASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP------
General information:
TITO was launched using:
RESULT:
Template:
2FCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106002 for 1283 contacts (-82.6/contact) +
2D Compatibility (PS) -18612 + (NN) -8009 + (LL) 976
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -143897.0 ( -112.16 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_2FCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCK-query.scw
PDB file :
Tito_Scwrl_2FCK.pdb
: