Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILDDYEKELLVISHQI-IAYLIKS-GVNPSQAQDVTQDVFLQILES--DFSLPLDKIKAWMYRTTIRRYIDLYRRNKRYNEILQKEFFIENNLYYTESEKFFELHEAI-LHLKKDYQTL----------IDLYYFNDFSIKEISEITGQSQSTIKIRLMRARREVKKYLEKDNFKI
4CXF Chain:A ((25-189))
-----------LVARHGVALAQAARSFGIPETDVDDVVQDTFVAAWHALDDFD-PDRPFRAWLFRIGLNKMRDLY----RFRR-------------------------AARLELARVASTLGKLDTGSREVIVLTAIVGMSQPEAAAVLGLSVKAVEGRIGRARAKLSALLDADS---
General information:
TITO was launched using:
RESULT:
Template:
4CXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42103 for 784 contacts (-53.7/contact) +
2D Compatibility (PS) -13042 + (NN) -5394 + (LL) 4136
1D Compatibility (HY) -6400 + (ID) 1900
Total energy: -64703.0 ( -82.53 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4CXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CXF-query.scw
PDB file :
Tito_Scwrl_4CXF.pdb
: