Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNNIIFSIEQYINDQEMPKGKQKVILSAIELFASQGFHGTSTAQLAKNAEVSQATIYKYFETKDKLLVFILELIVQTIGRPFFTELSTFSTKEELIHFFVQDRFKFIEKNNDLIKILMQELLINSETSTIFTKLINSTD-PNITKIFNCLGEGN----SLNKMEILRAVIGQFITFFIQLYILNI-KPESLEEELKQIEKQILKLLS
2F07 Chain:A ((7-194))
----------------QTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAIDH-SMEKWET-IYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAE-RFYIGFEQDENVEVYKKEIFTFLKRSLG
General information:
TITO was launched using:
RESULT:
Template:
2F07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125516 for 1283 contacts (-97.8/contact) +
2D Compatibility (PS) -19583 + (NN) -8144 + (LL) 1712
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -162531.0 ( -126.68 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_2F07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F07-query.scw
PDB file :
Tito_Scwrl_2F07.pdb
: