Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKLKKLQKENTLLEGRIDNSNNQTYTDMIVYLRGASISPYHQEL-IRNDIVNMLLEAQERQASLVSVFGEDRHDFINQVIKSTPKISKKEETLQRWDLAILLLTIQMIIFLGGYLITEALQQSVPDLIPITLLDVLFAIFISIIAVKIADTIIYATYNFDKSKEKKYFFRYMFLILSLIIAYILIGKYCHLPFINIPLWIYLIILGLSFSLHIIVKKYLNKHYYIEF |
2O4T Chain:A ((3-92)) | ----------HVSRVEKLPKDYQIVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAAFCDALIGDSKTYADLYQESIQQHVD-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32976 for 534 contacts (-61.8/contact) +
2D Compatibility (PS) -9310 + (NN) -60 + (LL) 14540
1D Compatibility (HY) -4800 + (ID) 500
Total energy: -33106.0 ( -62.00 by residue)
QMean score : 0.383
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