Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------MSIIIGLMAAMFIIR-LAYLKLSIANEKALRKNGAKEYGVGVSKAITVLHIIIYFSSVTEAILTKASFNFVSVIGLSLM-IFSVFMLHTVTRLLGRI--WTVKLMVDKNHQFVDHWLFRVVKHPNYFLNIAPELLGVTLLCHAKYTALFVLPIYAFVIYLRIREENLLLKTIIIPNGIKKSRVT----------------------------------------------------------------------------------------------- |
| 4V1S Chain:A ((37-395)) | PGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSFIWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGEDNVLGGG-----------IYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLLDKS----DNLLWDAKMVADGSVN------------TQKWSYNAGFMIRSWLKMYQATKDEKYLSQA--KATLASSEAKWYNSINGALNDPGYFAFSIIDSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEHWGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139339 for 1171 contacts (-119.0/contact) +
2D Compatibility (PS) -15420 + (NN) -3740 + (LL) 3488
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -158861.0 ( -135.66 by residue)
QMean score : 0.247
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