Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKDLLLELGLEELPAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGPSKKIALDAEGNFSKAAQGFVRGKGLSVDDIEFREVKGEEYVYVTKHETGKSAIDVLASVTEVLTELTFPVNMHWANNSFEYIRPVHTLVVLLDDQALELDFLDIHSGRISRGHRFLGSDTEILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEIDEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISVRNGNAEHIENVIKGNEKVLVARLEDGEFFWQEDQKLNIADLVEKLKQVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLLTGMVDEFD-------------------------ELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYANQKEVMAFISARIEKMIGSKVPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKVSIESLSRAFNLAEKVTHSVSVDYSLFENNQEKALYQAILSLELTEDMHDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLLNTK |
3M1T Chain:A ((102-228)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLADFWGNTFEVAIICQELAKRLGTL---PEEAFTCGILHSIGELLI-VNGDPAVAATISAAVADGADRNLMEKELLGYDNAEIGALLAQSWKFTPHLVKGIQFQNHPKSAE---PYSKLAGMLAMAKQIAADWDKIPDDERTSWLAQINILAGIKVDLGGLAEKLAKMHGQGMEMGKQLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27704 for 788 contacts (-35.2/contact) +
2D Compatibility (PS) -10886 + (NN) -7153 + (LL) 40792
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -8651.0 ( -10.98 by residue)
QMean score : 0.423
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