Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY
1KVN Chain:A ((9-26))
------------------VNLDSKKSRAEGRRIPRRFAVPNVKLHELVEASKELGLKFRAEEKKYPKSWWEEGGRVVVEKRGTKTKL
General information:
TITO was launched using:
RESULT:
Template:
1KVN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3985 for 70 contacts (-56.9/contact) +
2D Compatibility (PS) -1658 + (NN) 1435 + (LL) 2692
1D Compatibility (HY) -400 + (ID) 150
Total energy: -2066.0 ( -29.51 by residue)
QMean score : -0.178
(partial model without unconserved sides chains):
PDB file :
Tito_1KVN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KVN-query.scw
PDB file :
Tito_Scwrl_1KVN.pdb
: