Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRHFETTRRIVIKVGTSSLVQTSGK-INLSKIDHLAFVISSLMNRGMEVILVSSGAMGFGLDILKMDKRPQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQILLTRDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNGQMILMNGANPRDILKVLDGHNIGTYFAQGK |
4Q1T Chain:A ((5-263)) | MRSIIADSKRLVVKVG-SSLVTN---GLDHDAIGRWAAQIAALRNEGKEVVLVSSGAIAEGMQRLGWSRRPREIDELQAAAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEI----K--DNDTLGALVANLIEGDALIILTDQQGL------------LVAEASAGAPEL---------------MLTKILAAKRAAHSGANTVIASGRERDVLLRLASGEAIGTQLIART |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187477 for 1963 contacts (-95.5/contact) +
2D Compatibility (PS) -24103 + (NN) -8425 + (LL) -24
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -238629.0 ( -121.56 by residue)
QMean score : 0.518
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