Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MFLSIMAGVIAFVLTVIAIPRFIKFYQLKKIGGQQMHEDVKQHLAKAGTPTMGGTVFLIVALLVSLIFSIILSKENSGNLGATFGILSVVLIYGIIGFLDDFLKIFKQINEGLTPKQKMSLQLIAGLIFYFVHVLPSGTSAINIFGF----YLEVGYLYAFFVLFWVVGFSNAVNLTDGIDGLASISVVISLITYGIIAYN-----QTQF----------DILLIIVIMIGALLGFFVFNHKPAKVFMGDVGSLALGAMLAAISIALRQEWTLLFIGFVYVFETSSVMLQVAYFKYTKKKTGVGKRIFRMTPFHHHLELGGVSGKGNKWSEWKVDAFLWAIGIFMSAITLAILYL |
| 4J72 Chain:A ((20-363)) | FAFNVLKYITFRSFTAVLIAFFLTLVLSPSFINRL-------------------KKYTPTMGGIVILIVVTLSTLLLM-------RWDIKYTWVVLLSFLSFGTIGFWDDYVKLKN--KKGISIKTKFLLQVLSASLISVLIYYWADIDTILYFPFFKELYVDLGVLYLPFAVFVIVGSANAVNLTDGLDGLAIGPAMTTATALGVVAYAVGHSKIAQYLNIPYVPYAGELTVFCFALVGAGLGFLWFNSFPAQMFMGDVGSLSIGASLATVALLTKSEFIFAVAAGVFVFETISVILQIIYFRWTG-----GKRLFKRAPFHHHLELNG-------LPEPKIVVRMWIISILLAIIAISMLK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -355828 for 2589 contacts (-137.4/contact) +
2D Compatibility (PS) -30179 + (NN) -9094 + (LL) 2756
1D Compatibility (HY) -36400 + (ID) 6000
Total energy: -434745.0 ( -167.92 by residue)
QMean score : 0.347
|
|
|