Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQKDGKFKGYDVDVVKAVFKGS-KYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQSL-NLSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 4C0R Chain:B ((7-235)) | -------------------------------LATVGTTNPFSYEKKGKLTGYDIEVAKEVFKASDKYDVKYQKTEWTSIFSGLDSDKYQIGANNISYTKERANKYLYSNPTASNPLVLVVPKDSDIKSYNDIAGHSTQVVQGNTTVPMLQKFNKNHENNQ-VKLNFTS--EDLAHQIRNVSDGKYDFKIFEKISAETIIKEQGLDNLKVIDLPS----DQKPYVYFIFAQDQKD--LQKFVNKRLKKLYENGTLEKLSKKYLGGSYLPDKKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81883 for 1852 contacts (-44.2/contact) +
2D Compatibility (PS) -24768 + (NN) -9721 + (LL) 3572
1D Compatibility (HY) -22800 + (ID) 4800
Total energy: -140400.0 ( -75.81 by residue)
QMean score : 0.483
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