Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFY--QIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
2FCO Chain:B ((29-194))
--------------------------RGMTLEDDLNATNEYYRERGIAVIHKKPTPVQ------------------FRQASTTDYNGVYRGKYIDFEAKETKNKTAFPLKNFHAHQIRHMEQVVAHGGICFAILRFSLLNETYLLDASHLIAWWNKQEAGGRKSIPKQEIERHGHSIPLGYQPRIDYISVVDNVYFTR---
General information:
TITO was launched using:
RESULT:
Template:
2FCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101921 for 1091 contacts (-93.4/contact) +
2D Compatibility (PS) -15813 + (NN) -8604 + (LL) 3996
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -140892.0 ( -129.14 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2FCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCO-query.scw
PDB file :
Tito_Scwrl_2FCO.pdb
: