Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTILVTGYKNFELGIFQDKDPRITIIKKAIDKDFRRFLENGADWFIFMGNLGFEYWALEVALDLQKEY-DFQIATIFTFENHGQNWNEANKAKL-ALFKQVDF-VKYTFPSYENPGQFKQYNHFLINNTQGAYLFYDSENETNLKFLLEMMEKK---EAYDISFLTFDRLNEIYEE
2NX2 Chain:A ((3-177))
---VLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFLDEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRREQDGYPIYFITMDDLRVTVEE
General information:
TITO was launched using:
RESULT:
Template:
2NX2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111669 for 1307 contacts (-85.4/contact) +
2D Compatibility (PS) -18955 + (NN) -15268 + (LL) 244
1D Compatibility (HY) -16400 + (ID) 3700
Total energy: -165748.0 ( -126.82 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_2NX2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NX2-query.scw
PDB file :
Tito_Scwrl_2NX2.pdb
: