Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRIFK------ALLKMEFLLTKRQLANLIMAIGMPVAFFL--FFSGFMGEGLTKAIEAIYVRN-YMITMAGFSSLSFAFFTFPFSMKDDQLSNRMQLLRHSPVPMWQYYLAKIIRILFY-YCLAITVVFL-----TGHILRQVSMPI------EQWMQSFLLLLGGATCFIPFGLLVSYFKNTELMSMVANICYMSLAVLGGMWMPITMFPKWLQALSKLT---------PTYHLTQVILSPFANSFAGFSLIILIGYGIIMLVI--AYLLSQKRHSI |
| 4LXU Chain:A ((1-273)) | GHMIKICIAGKNNIAVNSLQFILKNYFEADQIVVIPNKNDKGIDSWQKSLLKFALDNNIKIVTLDEIYNIEQIIFFSLEFD----QIIKIENFKSDRLFNIHFSALPKYKGVFTSITPILNNELESGVTLHRIDNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNIQTIINNSYKDLKQTNINSS--YFSRKDIN-LVHKINFKKTSFEIHNQIRAFIFQEYQLPIINNSKIIKSILANEFIGYNVFEEFENYFIISGIDGFKIIAQKLNK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204567 for 1701 contacts (-120.3/contact) +
2D Compatibility (PS) -24338 + (NN) 1075 + (LL) 740
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -239740.0 ( -140.94 by residue)
QMean score : 0.115
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