Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEADSVELSLVRQGATINIEMIDNGCGFTNLDGDEFHSIQERLTIVEGTLTILSRSKPTHIQVVLKEV |
3EHH Chain:A ((16-215)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------NERIAELVKLEERQRMARDLVDTLGQKLSLMGLKSDLARKLIYKDP-EQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG----HGLLGMRERLEFANGSLHIDTE-NGTKLTMAIPN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72559 for 1356 contacts (-53.5/contact) +
2D Compatibility (PS) -20653 + (NN) -5134 + (LL) 15236
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -98110.0 ( -72.35 by residue)
QMean score : 0.467
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