Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFENIIYGIDGNVATIMLNRPDISNGFNIPMCQEIIDAIRLVSENKDVMFLVIEAQGPIFSIGGDLKVMKAAVESDDISSLTKIAELVNQISYDLLQLEKPVVMCVDGAVAGAAANIALAADFVIASKKSKFIQAFVGVGLAPDAGGLLLLSKSIGITRAVQLALTGESLSAEKAEALGIVYKLCE-SDKIGKIKDQLLKRLSRHSINSYQAIKSLAWEAAFKDWEQYKKLELQLQESLAFKQDFKEGVRAHADRRRPNFLGK
2EJ5 Chain:A ((4-258))
--YETIRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDL-------DHGDVLR-SRYAPMMKALHH----LEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPLSDWEEEVK-QFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLFQGN
General information:
TITO was launched using:
RESULT:
Template:
2EJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160270 for 2033 contacts (-78.8/contact) +
2D Compatibility (PS) -27468 + (NN) -13418 + (LL) 1776
1D Compatibility (HY) -12400 + (ID) 4650
Total energy: -216430.0 ( -106.46 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2EJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EJ5-query.scw
PDB file :
Tito_Scwrl_2EJ5.pdb
: