Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGRLIALGLVSLGALELYKNRKTIKDSYQNTKIETDSAKLKLERIKNDLAIISQEKEKIRLISQELNHKFQVFNKDIQPRLEEINQRMAKYQEKDE---
1IC2 Chain:A ((1-79))
MD----------------------AIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKAT
General information:
TITO was launched using:
RESULT:
Template:
1IC2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13755 for 300 contacts (45.9/contact) +
2D Compatibility (PS) -8382 + (NN) -2899 + (LL) 1844
1D Compatibility (HY) 800 + (ID) 650
Total energy: 4468.0 ( 14.89 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_1IC2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IC2-query.scw
PDB file :
Tito_Scwrl_1IC2.pdb
: