Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSG---FLLYQYSQLLKDFPKTHWP----IIVIVSIIILMLLAMGGIASYLEPADKQF-LLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGI-------IKWLVITYKVKVFYNNQNLNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLNILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPVIL-LIVLMLIVTEYYIPYKIKVSGKSF |
| 4TXD Chain:A ((21-369)) | KRDVLAELGLGDLRPYLRSIGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSGGAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEVIGKAKD---LGFKKVSEEWNCTIQ------GMDGFCPHCTIFGAALTEQHNEKFGGLSIGIKTRVRFDPAFAT-QRRITPETHNKVTE-GHLSMTGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGK-----------YASTTAYDLAAENAGKGYEEVKKNLKERLEKL-----GFTPV--DNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338511 for 2568 contacts (-131.8/contact) +
2D Compatibility (PS) -33545 + (NN) 1287 + (LL) 3548
1D Compatibility (HY) -6800 + (ID) 2650
Total energy: -376671.0 ( -146.68 by residue)
QMean score : 0.167
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