Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRNEFYNQLINSEPIGFIDPFTDLGEFDSIQMKFKQPVRNLVNKYSGKPYNLSWQNKIEQMRVLYIKYQKSLKLEDEEQEVHNRVKNKKSKKYVHEIVTTYLKLGFRFKEIEARVSLFNTRLRRNWKRSDYVTTDNPEFYLKKDLQNGYCSPNSFLPRSMKIN
3MZY Chain:A ((155-188))
-----------------------------------------------------------------------------------------------KEVLTYLI-RGYSYREIATILSKNLKSIDNTIQRI----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10672 for 206 contacts (-51.8/contact) +
2D Compatibility (PS) -3580 + (NN) -219 + (LL) 7724
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -9897.0 ( -48.04 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_3MZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MZY-query.scw
PDB file :
Tito_Scwrl_3MZY.pdb
: