Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYDTYSDLVNALEKGFLDINGKTNGNITGENAEKMASFYRYWSNYLDSTPAFLSFLAYIPGGIAKALYAITVSLEHVFNNMFKLFGLFGYLGDTNTVIGKFFQGFQLVGTTLFILILVTSAIAGVFTKPVKYKGVITNFLLVTMVTAVLPLALTTISSVVAQDAMNIQTVSSEAPEGSRYYSSLAIQPMKNNVVDLKVLIDNDFSTELFPLDNFGYIKPPKEGSTPVNNITDSTDKRDTTDFATRIDFGATYGASNSDLLKDMEAQYKKKFGVDGIEGLFLHRLNSNQTGVETITKHRIAGELNSFEPVYMRYKVNWIGMFMQYIILIVLLISMSIKLVKSVFDIIIQAMISPIQGYSSLSHSKKYKELLRTMGGALAGIFFEVVIMRVTLEICRDLPTLSVSTVTKLSGGFFDGLSMWEQCLAACLVYIGVFLAAMQGVSMIERWLGVSTGQSETAQQLIGAMMAGQAFATGAGVVGNMALGLGGFGMNMAGKVPGAVASGSKVLGNSLATTGGGIRGAFNAVRDQGVVNAAKGGLSNMYSAGDLAGKEAIGKAKDFAGGIADSLGNKEQAGHDAVYRGLKDYSHPEEV------KPVSPFDPDASAGFEPLSDARPAGGGITDPTLPSSEPSDGISEPLQ--SVTITDESGTNMVPLHEWVGDSEPPKGGYKMFETVPNSITNQPDVKQDLPTSYNHKVQSNFQKSMHQMSYVNQQMQQSAQRMQGQSHIRGAEIDESEE |
1N9G Chain:B ((55-126)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCG--NEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21997 for 300 contacts (73.3/contact) +
2D Compatibility (PS) -6548 + (NN) 1784 + (LL) 37664
1D Compatibility (HY) 0 + (ID) 1100
Total energy: 53797.0 ( 179.32 by residue)
QMean score : 0.425
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