Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRREVIVFLENQGAIVQGYVSSQTEILLAGHKQLDLFEPDKRSRKYEAALSRIATGQAITILSEEAFFNLVKTSQI
2EBU Chain:A ((422-481))
-ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSG--------QSKSDKAAAL-----GTKIIDEDGLLNLIRT---
General information:
TITO was launched using:
RESULT:
Template:
2EBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30319 for 330 contacts (-91.9/contact) +
2D Compatibility (PS) -6632 + (NN) -4266 + (LL) 1136
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -42581.0 ( -129.03 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_2EBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EBU-query.scw
PDB file :
Tito_Scwrl_2EBU.pdb
: