Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK
2WVF Chain:A ((9-51))
--------------------------------------SIIRFSVSLQQNLL-DELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPND
General information:
TITO was launched using:
RESULT:
Template:
2WVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10977 for 191 contacts (-57.5/contact) +
2D Compatibility (PS) -4725 + (NN) -2196 + (LL) 1984
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -19614.0 ( -102.69 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_2WVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WVF-query.scw
PDB file :
Tito_Scwrl_2WVF.pdb
: