Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIFDERELKERFTHENRVSFYEFVAKYDAQMVPVMKAKGYRCIHSMERTVVFTFGEFTIRRRRWQKGEHWVVPVDEKLGLKKNVRYSLEFMYQIASLAT--MMPYEKVIKVVQMMYCIVITKPTVVKAVKISRELLKEKEAYRFFDEDIPVDKEPVDMIYLEGDGVMVKAREEGLDNRNVDLSHFVVHTGSQKVGSNRFVLQNKKEFVSLDNRQTRQKILDYLYNHFYIAPNTLLITNSDGGHGYTPYVFKEIAKALKVKQHEHFWDRYHVNEKIKSFFKLYPVELMTGAFQSIKQHDKEKLRTVLDTTEALILMEEEMEGFNQFKRKLLNNFQYTKSAELRGFSRAGIGVMESQHRKITYRMKKRGMYWTIQGAETMSQLIVLSYEGQLRDLFFGSWREDYQKYQELENLSAGKIKHEQNKINKRYDLQTLGRLRYGRHRNL
2COB Chain:A ((12-57))------------------------------------------------------------------------------------RQYNSEILEEAISVVMSGKMSVSKAQSIY------GIPHSTLEYKVKERLGTLKNPPKKKMKLMR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2COB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45834 for 281 contacts (-163.1/contact) +
2D Compatibility (PS) -4433 + (NN) 758 + (LL) 29684
1D Compatibility (HY) 0 + (ID) 450
Total energy: -20275.0 ( -72.15 by residue)
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_2COB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2COB-query.scw
PDB file : Tito_Scwrl_2COB.pdb: