Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTISNQELTLTPLRGKSGKAYIGTYPN-------GERVFVKYNTTP----------------ILPALAKE--QIAPQLLWARRTS--NGDMMSAQEWLDGRTLTKE-----------D----M-G--SKQIIHILLRLHKSRPLVNQLLQLGYKIE--NPYD---LLMDWEKQTPIQIRENTYLQSIVTELKRSLPEFR-TEVATIVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHYIPQ----------K-----HWKDWLSYYGYKDNEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
3ATS Chain:A ((29-317)) | -----------DSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLT----DTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVEL-GDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ATS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100844 for 1514 contacts (-66.6/contact) +
2D Compatibility (PS) -22086 + (NN) -143 + (LL) 1656
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -130367.0 ( -86.11 by residue)
QMean score : 0.401
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