Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSFKKLLLLFSIITILSIACTPHAKASGRSWKSWFIEQYFWLKRDKSYYKVQDESSFQKYLNASREQSDKGYYLDPNSVNGGLVQERLFDMQVYSWNDNGKANQKTIFYLAGGSYLNNPTPYHISMLKTLSTSLDAKIILPIYPKTPRYTYDYAIPRLVNLYRHFHEK--NANLTLMGDSAGGGLALGLAHALSHQSGQEAIPQPKNIILLSPWLDVTMKHPEIPK-YEDTDPILSAWGLARVGEIWANGSNNTNHTYVSPKNAPATKLAPITLFTGTREIFFPDIRDYAAQLQAANHPVNYIAQEGMNHVYPIYPIEEAKTAQYQMIDIINKTP |
| 3D7R Chain:A ((75-321)) | -----------------------------------------------------------------------------------NLEKLSLDDMQVFRFNFRH-QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLD----NQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGL-PLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144407 for 2098 contacts (-68.8/contact) +
2D Compatibility (PS) -25828 + (NN) -11404 + (LL) 5420
1D Compatibility (HY) -20400 + (ID) 3750
Total energy: -200369.0 ( -95.50 by residue)
QMean score : 0.571
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