Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHTYRVSGMKCDGCAKTVSDKLSSVIGVDEVNVDLTKNQVVVSGK----TFKWLLKRSLKDTKYSLEEEIN
1OSD Chain:A ((4-70))
-TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVT-FDDAKTSVQKLTKATADAGYPSSVKQ-
General information:
TITO was launched using:
RESULT:
Template:
1OSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32449 for 466 contacts (-69.6/contact) +
2D Compatibility (PS) -6876 + (NN) -2025 + (LL) 140
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -45860.0 ( -98.41 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1OSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OSD-query.scw
PDB file :
Tito_Scwrl_1OSD.pdb
: