Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVVLKQRIPLKIKRMGINGEGIGFYKKTLIFVPGALKGEEVFCQISSVRRNFAEAKLLKINKKSKNRVDPACSIYKECGGCQIMHLQYDKQLEFKTDVIRQALMKFKPEGYENYEIRKTIGMSEPEHY--RAKLQFQVRSFGGNVRAGLYAQGTHRLIDIKDCLVQDSLTQEMINRVAELLGKYKLPIYNERKIAGVRTVMIRRAQASGEVQLIFITSKRLDFDDVVIELVREFPELKTVAVNINASKTSDIY----GQITEVIWGQESINEEVLDYGFSLSPRAFYQLNPKQTQILYSEAVKALDVKEDDDLIDAYCGVGTIGLAFAGKVKSVRGMDIIPEAIQDAKENALHMGFTN-THYEAGKAEDVIPR-WYSEGFRANALIVDPPRTGLDDKLLNTILKMPPEKMVYVSCNTSTLARDLVTLTKV-YHVHYIQSVDMFPHTARTEAVVKLQRKE |
| 1UWV Chain:A ((15-431)) | ------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKS----AALARLM-----KHDVSEVIA-DVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGS----LQAMRHLGHVELVQA----TSGTLMILRHTAPLSSADREKLE-------------RFSHSEGLDLYLAPDSEILETVSGEMPWYDSN-GLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGF--DKVLLDPARAGAAG-VMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175124 for 3364 contacts (-52.1/contact) +
2D Compatibility (PS) -42835 + (NN) -5644 + (LL) 4060
1D Compatibility (HY) -24000 + (ID) 5950
Total energy: -249493.0 ( -74.17 by residue)
QMean score : 0.424
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