Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIINSFDNSRKAIINPEDINSPIKGFPKTVITCFARETFNRILEELPHREIARTSVANLEIPIYELEFKEQKIGFFNAYVGASACVAILEDIIVFGMENLIVFGTCGVLDSSIEETSIIIPRSAI-RDEGTSFHYSEA--SSEIAVNTKFHEEFKSFLDRQAVSYTEGKVWTTDGIYRETVDKMLEHKRNGAICVDMECSAIAALSKFRNINHFQFFYSADNLDAEVWEARSLGNSEDLEKKDKIAYIAMEFAIETF
1JE0 Chain:A ((10-235))
----------------------KGEVAERVLVVGDPGRARLLSTLLQNPKL---TNENRGFLVYTGKYNGETVSIATHGIGGPSIAIVLEELAMLGANVFIRYGTTGALVPYINLGEYIIVTGASYNQGGLFYQYLRDNACVASTPDFELTNKLVTSFSKRNLKYYVGNVFSSDAFYAEDEEFVKKWSSRGNIAVEMECATLFTLSKVKGWKSATVLVVSDNLA-----------EELEKSVMDGAKAVLDTLTS--
General information:
TITO was launched using:
RESULT:
Template:
1JE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178418 for 1801 contacts (-99.1/contact) +
2D Compatibility (PS) -23110 + (NN) -7272 + (LL) 2228
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -218122.0 ( -121.11 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1JE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JE0-query.scw
PDB file :
Tito_Scwrl_1JE0.pdb
: