Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSFQIVEKPAMILAGVTLENVKS---NQECPKLWEKLHKQYNPSKLKEKG---IQQAIGICKTQPDFRFDYSATYRVETSVQAPKGLEIIRIPSATYAVISVKGPMPS----SLQETWRKIIQGFFRENNLKPANSPNLEIYSSQHPQDTDYQMEIWLAIADITNKSKTNLI
3LUR Chain:A ((2-158))
-MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGLCIPELDGKMSYMIAVTGDNSA-DIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYIH-QYQ---ANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG----------
General information:
TITO was launched using:
RESULT:
Template:
3LUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53269 for 1045 contacts (-51.0/contact) +
2D Compatibility (PS) -15603 + (NN) -5041 + (LL) 1200
1D Compatibility (HY) -9200 + (ID) 1350
Total energy: -83263.0 ( -79.68 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3LUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LUR-query.scw
PDB file :
Tito_Scwrl_3LUR.pdb
: