Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIQEMKDTTFELQENFRRLNYPIKQVAKDLQLNISEVESLLS---LDVTYPGDVWMLRDYLEDMLKKEGKEVYPFSRLASHSANRWYPYETPWRY
4D18 Chain:B ((370-425))
-----------------YTRIHIPF--ISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA
General information:
TITO was launched using:
RESULT:
Template:
4D18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17780 for 271 contacts (-65.6/contact) +
2D Compatibility (PS) -5256 + (NN) 897 + (LL) 1904
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -25935.0 ( -95.70 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_4D18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D18-query.scw
PDB file :
Tito_Scwrl_4D18.pdb
: