Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYKLVMIILILVILIYLLLRLHYLEELLKHYHFKNDEGVCSLSRTKNPLYLLMAMITFLPN---LINWIANGFEAIDIVRLIPVVVFLWLYYCGDDDE
3S29 Chain:A ((543-609))
------------------LTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEK
General information:
TITO was launched using:
RESULT:
Template:
3S29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23845 for 307 contacts (-77.7/contact) +
2D Compatibility (PS) -6847 + (NN) -1577 + (LL) 2872
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -34247.0 ( -111.55 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_3S29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S29-query.scw
PDB file :
Tito_Scwrl_3S29.pdb
: