Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKEVTPEMLNYNKYPGPQFIHFENIVKSDDIEFQLVINEKSAFDVTVFGQRFSEILLKYDFIVGDWGNEQLRLRGFYKDAST-IRKNSRISRLEDYIKEYCNFGCAYFVLENPNPRDIKFDDERPHKRRKSRSKSQSSKSQTRNNRSQSNANAHFTSKKRKDTKRRQERHIKEEQDKEMTSAKQHFVIRKKK
2KL5 Chain:A ((10-97))
-----------------------EIMILIQNAEFELVHNFKDGFNEEAFKARYSDILNKYDYIVGDWGYGQLRLKGFFDDQNQKATFETKISTLDEYIYEYCNFGCAYFVLKRIRKLEHHHHHH---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64166 for 581 contacts (-110.4/contact) +
2D Compatibility (PS) -9172 + (NN) -1766 + (LL) 4288
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -83116.0 ( -143.06 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_2KL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KL5-query.scw
PDB file :
Tito_Scwrl_2KL5.pdb
: