Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELPKTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTIEASRQGANIAGADVTVIDSTFTDQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNHELVPIVKGRGLKTFSKWLDNFVESAQTRKIAEIGISYCGKADMANNFKEKLAV-LGAPISVLETGSIIQTHTGEDAFAVMVRYE
2G7Z Chain:A ((7-282))
---IKIVTDSSITIEPELIKALDITVVPLSVMIDSKLYSDNDLKEEGHFLSLMKASKSLPKTSQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAEIAEAPVTVLDSGFTDQAMKFQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIGVSTLENLVKGGRIGRVTG-----LNVKVVMALKNDELKTLVKGRGNKTFTKWLDSYLAKNSHRPIAEIAISYAGEASLALTLKERIAAYYNHSISVLETGSIIQTHTGEGAFAVMVRYE
General information:
TITO was launched using:
RESULT:
Template:
2G7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172047 for 2330 contacts (-73.8/contact) +
2D Compatibility (PS) -29995 + (NN) -14746 + (LL) 716
1D Compatibility (HY) -33600 + (ID) 9600
Total energy: -259272.0 ( -111.28 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2G7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G7Z-query.scw
PDB file :
Tito_Scwrl_2G7Z.pdb
: