Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYREITAVEHDRFVSESNQTNLLQSSNWPKVKDNWGSQLLGFFD-GETQIASASILIKSLPLGFSMLYIPRGPIMDYSNLDIVTKVLKDLKAFGKKQRALFIKCDPLIYLKMVNAKDFENSPDEKEGLIAIDHLQRAGADWTGRT---TDLAHTIQPRFQANLYANQ-----FGLDKMSKKTRQAIRTSKNKGVDIQFG-SHELLEDFAELMKKTEDRKGINLRGIDYYQKLLDTYPN-NSYITMASLDVAKRLEKIEKECQIAQSERIKSLELNREKKVKQHQGTIDRLNKEIDFLKEAQKAYDRDIIPLAATLTLEFGNTSENIYAGMDDYFKSYSAPIYTWFETAQRAFERGNIWQNMGGIENDL-SGGLYHFKSKFEPII-EEFIGEFNIPVNRLLYKASNYVYALRKKRNS |
| 3GKR Chain:A ((7-334)) | -NDPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKALDG-RAYVLRFDPEVAYSD----------------EFNTTLQDHGYVTRNRNVADAGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAERE-G---------------------------------------------------------KLLSTGIALKYGRKIWYMYAGSMDG-NTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103985 for 2525 contacts (-41.2/contact) +
2D Compatibility (PS) -33716 + (NN) -9006 + (LL) 7092
1D Compatibility (HY) -12400 + (ID) 4100
Total energy: -156115.0 ( -61.83 by residue)
QMean score : 0.463
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