Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKS-NYFKGQIDYAVVIPV---FFLLMIGLASIYVATMNDYPSNIYIAMFQQVSWIIMGCIIAFVVMLFSTEFLWKATPYLYALGLTLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQPSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLGLFGLVTLPVMILLMLQKDLGTALVFLAILSGLILLSGISWWIILPI---LSTIVLFIASFLMIFISPNGKEWFYNLGMDTYQINRLSAWIDPFSFADSIAYQQTQGMVSIGS------------GGVTGKGFNILELSVPVRESDMIFTVIAENFGFIGSAIVLGLYLIIIYRMLRITIESNNQFYTFISTGFIMMIVFHVFENIGAAVGILPLTGIPLPFISQGGSSLLSNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI--------------- |
| 4ZOX Chain:A ((3-381)) | MSNNSLTYFDKHTDSVFAIGHHPNLPLVCTGGG--------DNLAHLWTSHSQPPKFA--GTLTGYGESVISCSF----TSEGGFLVTADMSGKVLVHMGQK----GGAQWKLASQMQEVEEIVWLKT-------------HPTIARTF--------AFGATDGSVWCYQINEQD-GS---LEQLMSGFVHQQDCSMGEFINTDKGENTLELVTCSLDSTIVAWNCFTGQQLFKITQAEIKGLEAPWISLSLAPETLTKGNSGVVACGSNNGLLAVINCNNGGAILHLSTVIELKPEQDELDASIESISWSSKFSLMAIGLVCGEILLYDT-----SAWRVRHKFVLEDSVTKLMFDNDDLFASCI-----NGKVYQFNARTGQ---EKFVCVGHNMGVLDFILLHPVANTGTEQKRKVITAGDEGVSLVFEVPN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -377756 for 2792 contacts (-135.3/contact) +
2D Compatibility (PS) -35924 + (NN) 8135 + (LL) 6020
1D Compatibility (HY) -2400 + (ID) 3350
Total energy: -405275.0 ( -145.16 by residue)
QMean score : 0.094
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