Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYHDYIWDLGGTLLDNYESSTRAFVETLKEFGYQADHDSVYQKLKESTADAIAYFIPEEADFLKEYKANEAKVLETPILFQGAKELLAKIQRQGSRNFLVSHRDNQVIVILEKTEIIDYFTEVVTADNGFSRKPSPESMLYLKEKYQIDNCLVIGDRDIDKQAGESAGFDTLLVDGSKSLMEIIE-
2FI1 Chain:A ((4-190))
MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI
General information:
TITO was launched using:
RESULT:
Template:
2FI1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99385 for 1461 contacts (-68.0/contact) +
2D Compatibility (PS) -20428 + (NN) -11299 + (LL) 0
1D Compatibility (HY) -20000 + (ID) 5800
Total energy: -156912.0 ( -107.40 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_2FI1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FI1-query.scw
PDB file :
Tito_Scwrl_2FI1.pdb
: