Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIITFTNKVVVITGAGGVLCGYMAKEFAKAGAKVAL-LDLNQEAAQTFADEIVEEGGIAKAYKANVLSKENLEEVHQAVLEDLGPTDILVNGAGGNNPKATTDNEFHELDLPSETKTFFELDEAGISFVFNLNYLGTLLPTQVFAQDMVGREGANIINISSMNAFTPLTKIPAYSGAKAAISNFTQWLAVHFSKVGIRCNAIAPGFLVTNQNRNLLFTEDGQPTARAEKILNNTPMGRFGEASELIGGLFFLADEKSSSFVNGVVLPIDGGFAAYSGV
4DMM Chain:C ((24-266))----LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAG-----ITRDT------------LLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM----------------EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA---


General information:
TITO was launched using:
RESULT:

Template: 4DMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148511 for 2083 contacts (-71.3/contact) +
2D Compatibility (PS) -25114 + (NN) -5050 + (LL) 1884
1D Compatibility (HY) -16400 + (ID) 4200
Total energy: -197391.0 ( -94.76 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_4DMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DMM-query.scw
PDB file : Tito_Scwrl_4DMM.pdb: