Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKELRSKLEKDYGIVFANQELLDTAFTHTSYANEHR---LLNISHNERLEFLGDAVLQLLISQYLFTKYPQKAEGDLSKLRSMIVREESLAGFSRLCGFDHYIKLGKGEEKSGGRNRDTILGDLFEAFLGALLLDKGVEVVHAFVNKVMIPHVEKGT-YERVKDYKTSLQELLQSHGDVKIDYQVTNESGPAHAKEFEVTVSVNQENLSQGIGRSKKAAEQDAAKNALATLQ
1O0W Chain:A ((6-235))
-RKIVEEFQKETGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLL
General information:
TITO was launched using:
RESULT:
Template:
1O0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66521 for 1762 contacts (-37.8/contact) +
2D Compatibility (PS) -24810 + (NN) -11004 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 4750
Total energy: -124477.0 ( -70.65 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1O0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0W-query.scw
PDB file :
Tito_Scwrl_1O0W.pdb
: