Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKDEMIAKGAKYIQSIYQDPFIQGIIKGRLDHDVICHYLQADNIYLGKFADIYALCLAKSDNLRDKQFFLEQIDFTLNRELADGEGPHQALAAYTNRSYQDI-IEKGVWYPSADHYIKHMYFHFY-ENGIAGALAAMSPCPWIYHQLAKKIIEENQFLNGNPFNNWITFYANDTVEELMENYFRMMDYYAQNLSKEKQADLVDAFVKSCQMRDVFFKWQ
3NO6 Chain:A ((22-233))
-FSKELREASRPIIDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFMLEGEVE----AHEVLADFINEPYEEIVKEKV-WPPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVYAVIGKRAMEDPKLNKESVTSKWFQFYSTE-MDELVDVFDQLMDRLTKHCSETEKKEIKENFLQSTIHERHFFNMA
General information:
TITO was launched using:
RESULT:
Template:
3NO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162918 for 1653 contacts (-98.6/contact) +
2D Compatibility (PS) -22187 + (NN) -5778 + (LL) 136
1D Compatibility (HY) -20400 + (ID) 3550
Total energy: -214697.0 ( -129.88 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3NO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NO6-query.scw
PDB file :
Tito_Scwrl_3NO6.pdb
: