Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQKKARLIYNPTSGQEIMKKNVAEVLDILEGFGYETSAFQTTPTKNSARDEAARAAQAGFDLIVAAGGDGTINEVVNGIAPLKRRPKMAIIPTGTTNDFARALKIPRGNPIEATKLIGKNQIVKMDIGQAQEDNYFINIAAAGSLTELTYSVPSQLKTTFGYLAYLAKGVELLPRVRKVPVKITHDKGEFIGDASMIFVAITNSVGGFEQIAPDAKLDDGKFTLILVKTANLIEIMHLIRLVLAGGKHINDKRVEYIKTSYLTIEPLSDERMMINLDGEYGGDAPITLANLKNHIRFFANTDEISDDALVLDKDELAIEAIAQKFANEVDDLEGLGD |
| 2QV7 Chain:A ((21-320)) | HMMRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIG-DATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPND-IMGALDVIIEGHSTKVDIGKMN-NRYFINLAAGGQLTQ-------------GPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASR-GEHTKHPKVIYEKAKAINISSF--TDLQLNVDGEYGGKLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNL------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182453 for 2454 contacts (-74.3/contact) +
2D Compatibility (PS) -30602 + (NN) -11661 + (LL) 2344
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -252622.0 ( -102.94 by residue)
QMean score : 0.519
|
|
|