Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRRAKEKDLPAIAELLKQILVLHHGVRPDIFHTRGSKFSKEQLKEMLMD-----ESRPIFVYESDEGKVVAHLFLQLQEKRD-------LP----------------RKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
1U6M Chain:A ((3-174))
LIRSATKEDGQAIARLVLVILKDMEL--PI-LEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH-AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGH
General information:
TITO was launched using:
RESULT:
Template:
1U6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61457 for 982 contacts (-62.6/contact) +
2D Compatibility (PS) -15299 + (NN) -6146 + (LL) 420
1D Compatibility (HY) -4400 + (ID) 2250
Total energy: -89132.0 ( -90.77 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_1U6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6M-query.scw
PDB file :
Tito_Scwrl_1U6M.pdb
: