Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
3HCG Chain:A ((4-146))
-KPSDAELKRTLTEEQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPIDAKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQMDAAGYGALKSKVK
General information:
TITO was launched using:
RESULT:
Template:
3HCG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67234 for 1134 contacts (-59.3/contact) +
2D Compatibility (PS) -15345 + (NN) -6159 + (LL) 208
1D Compatibility (HY) -12400 + (ID) 4250
Total energy: -105180.0 ( -92.75 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3HCG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HCG-query.scw
PDB file :
Tito_Scwrl_3HCG.pdb
: