Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINIYEATKHAMIDAVSHLSVAPEHLLIDAMVLDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML-------------------------------------- |
| 4HHT Chain:A ((1-229)) | -----------------------------------------------------------GIDELYKKEFGIVAGVDEASRGCLAGPVVAAAVVLEK--EIEGINDSRLLDEIMEK----------AAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKER |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93039 for 1576 contacts (-59.0/contact) +
2D Compatibility (PS) -19662 + (NN) -4471 + (LL) 6884
1D Compatibility (HY) -17200 + (ID) 4400
Total energy: -131888.0 ( -83.69 by residue)
QMean score : 0.428
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