Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPDSSFKVLSDMAYNIEKSKAESNGHLQIIEGSQIIDFHQKRSFMVLEVNDDI--NNGMQAMACQSLDESNHIVIAYSGTNAFNKKDILTDIDSVVLGKNNKLLT-----CPSSITLREDGISLPCKNPSQITTSKLFAQKIKMNYPDATLWLTGHSLGGYLAMIVASEMR-----LSARVFNSPSPINNMSEAATSYVISH--------------PEKYHSYRINKDYIGNFGINSSDDKLGISKRVNAKKQHGFYKKIFFHELTRFRLNQQGQIVDIDENKQD |
| 3O0D Chain:A ((19-238)) | ----EKYARLANIGYCVGPGTKIF-KPFNCG-LQ----CAHFPNVELIEEFHDPRLIFDVSGYLAVD-HASKQIYLVIRGTHS--LEDVITDIRIMQAPLTNFDLAANISSTATCDDCLVHNGFIQSYN-NTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKVNGHDPLVVTLGQPIVG---NAGFANWVDKLFFGQENPDVSKVSKDRKLYRITHRGDIVPQVPFWDGYQHCSGEVFIDWPLIHPPLSNVVMCQGQSNKQCSAGNTLLQQVNVIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47056 for 1656 contacts (-28.4/contact) +
2D Compatibility (PS) -20519 + (NN) -4237 + (LL) 808
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -80104.0 ( -48.37 by residue)
QMean score : 0.318
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