Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLIEPIRNGKRITDGAIALAMQVYILQNVF-LDDDILFPYYCDPKVEIGKFQNAVIETNQEYLKEHDIPVVRRDTGGGAVYVDSGAVNICYLMKDHG-QFGDFKRAYEPAIKALKTLGASSVEMRGRNDLIIDGKKVSGAAMTIVNGRIYGGYSLLLDVDFDAMEKVLNPNRKKIESKGIKSVRSRVGDIRSHLSEDYRHITTDQFKDLMVCQLLHIDHIDQAKRYHLTEKDWAAIDALADEKYKNWDWNYGNSPQYSYHRDARFPSGTYDFHLEIEKGIITNCRIYGDFFSSKDISDIENLLIGCPMKEELVLEKLSTVSLEDYFGQTSPEEIKAVLFP |
| 1VQZ Chain:A ((16-340)) | --------IINHSNDTAFNIALEEYAFKHLLDE-DQIFLLWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTIISKEDENKAFDFKSFSTPVINTLAQLGVKA-EFTGRNDLEIDGKKFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPK---KITVEKFRDLLLEYMKKEYPE--MTEYVFSEEELAEINRIKDTKFGTWDWNYGKSPEFNVRRGIKFTSGKVEVFANVTESKIQDIKIYGDFFGIEDVAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAVVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168274 for 2597 contacts (-64.8/contact) +
2D Compatibility (PS) -34378 + (NN) -10759 + (LL) 1224
1D Compatibility (HY) -27600 + (ID) 5850
Total energy: -245637.0 ( -94.58 by residue)
QMean score : 0.501
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