Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVK--VSNALRSLHKAHDYEEVLEELKSWLIDKSSSKEPLVQPTLSSFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKSPNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKDFNEFATFPT-IEEANHYQLTPEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 4US5 Chain:D ((5-333)) | VKLSVVEQAPVVEGLTPAHSLQHSIELARLADRLGYERFWVAEHHAEIFNAVPAPEILIARIAAETSGIRVGSGGVLLSLYSPLKVAEVFRTLHALYPDRIDLGIGRA-NRVKLPVFAALRD--SSDDLWRRLEQLRAYL-DPDSGLPFTVSPRMPGGPALWLLGASVSSADAAARLGLPYAYAHFITPDF-----TREAMDTYRAAFVPGPDTPSPRPILSVVVCCAETDAEAQRVYATHRLFHRRMSQGDVRLLPPADLAVAEMDKPGPDPLAEESFEWPRYVVGSPDRVRDQLTKMADATGAEELGVVSMIHDQRDRLRSYRLLAEAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152474 for 2762 contacts (-55.2/contact) +
2D Compatibility (PS) -34395 + (NN) -18296 + (LL) 716
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -226649.0 ( -82.06 by residue)
QMean score : 0.495
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